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Intron Name: Anas_platyrhynchos_platyrhynchos_22_3877792_3878487_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3877792 - 3878487

Intron Length:

696

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTGAGTGCG

5'SS Class:

major

3'SS Sequence:

CTTTCCGTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TACCTTTTAAAA

Flanking Amino Acid:

HGEWTDEMAPTLGHIGKVIK

Intron Amino Acid Position:

360

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.5

0.44

1.1

59.1

39.9

Major BPS

90.4

0.7

90.2

19.3

Major PPT

82.5

0.73

0.8

76.6

31.9

Minor 5ss

30.5

-2.2

3.2

42.5

44.2

Minor BPS

57.4

0.23

1.4

62.68

37.3

Associated Gene:

Gene:

MIB2

Ensembl Gene ID:

ENSAPLG00000010686

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011186

3863623 - 3889389

25767