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Intron Name: Anas_platyrhynchos_platyrhynchos_22_3981352_3982539_F


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
3981352 - 3982539

Intron Length:
1188

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTTGGTGAG

5'SS Class:
major

3'SS Sequence:
TCTTGGTCCACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTTTTAT

U12 Branch Point Sequence:
AGTCTCTTACCT

Flanking Amino Acid:
IVLKEVVDAKGRTSFYEQYG

Intron Amino Acid Position:
247

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
72.6
0.53
1.2
64.4
41.8

Major BPS
84.1
0.85
0.9
75.3
39.4

Major PPT
74.8
0.56
0.9
68.2
37.6

Minor 5ss
27
-2.6
3.1
31.3
43

Minor BPS
61.5
0.44
1.6
76.39
39.9

Associated Gene:

Gene:
H6PD

Ensembl Gene ID:

Chromosome:
22

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

3976511 - 3984835
8325

3977567 - 3984835
7269