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Intron Name: Anas_platyrhynchos_platyrhynchos_22_4118935_4119414_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4118935 - 4119414

Intron Length:

480

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TTTGGCATTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTGCAT

U12 Branch Point Sequence:

TTTGGCATTACA

Flanking Amino Acid:

LLAMFLAGRIRLRRIDAFAS

Intron Amino Acid Position:

329

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.7

0.98

0.7

81.3

32.8

Major BPS

62.7

0.32

1.4

39.9

Major PPT

77.5

0.62

0.9

69.8

40.4

Minor 5ss

30.9

-2.2

3.2

39.6

46.4

Minor BPS

46.4

-0.2

2.4

68.29

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009474

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009883

4110266 - 4134056

23791