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Intron Name: Anas_platyrhynchos_platyrhynchos_22_4119619_4129993_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4119619 - 4129993

Intron Length:

10375

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGAGCC

5'SS Class:

major

3'SS Sequence:

CTGTCATTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

CGTTGCTAAATG

Flanking Amino Acid:

STGHRRYRPRRYLSGDSITL

Intron Amino Acid Position:

397

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.59

1.3

68.7

37.5

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

79.5

0.66

0.9

73.3

Minor 5ss

27.1

-2.6

3.1

34.4

41.3

Minor BPS

47.9

-0.2

2.2

55.32

46.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009474

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009883

4110266 - 4134056

23791