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Intron Name: Anas_platyrhynchos_platyrhynchos_22_4172552_4173198_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4172552 - 4173198

Intron Length:

647

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCCTT

5'SS Class:

strong_major

3'SS Sequence:

TCCATCTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

TCTGTTTCATCC

Flanking Amino Acid:

YGNYPLYQFQYIRSCLHRGL

Intron Amino Acid Position:

261

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

77.8

38.7

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

81.9

0.72

0.8

76.1

32.2

Minor 5ss

38.4

-1.3

3.3

55.8

48.4

Minor BPS

46.3

-0.3

1.8

57.16

42.4

Associated Gene:

Gene:

PIK3CD

Ensembl Gene ID:

ENSAPLG00000008183

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008631

4169135 - 4189459

20325