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Intron Name: Anas_platyrhynchos_platyrhynchos_22_4183571_4184178_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4183571 - 4184178

Intron Length:

608

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

TCATGCTGCGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTCAT

U12 Branch Point Sequence:

GTACTCATAACC

Flanking Amino Acid:

GVGIIFKNGDDLRQDMLTLQ

Intron Amino Acid Position:

785

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.5

Major BPS

87.1

0.92

0.7

85.9

22.5

Major PPT

62.5

0.28

57.8

38.3

Minor 5ss

40.3

-1.1

3.1

56.2

42.2

Minor BPS

0.2

1.6

66.69

37.9

Associated Gene:

Gene:

PIK3CD

Ensembl Gene ID:

ENSAPLG00000008183

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008631

4169135 - 4189459

20325