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Intron Name: Anas_platyrhynchos_platyrhynchos_22_4184258_4185090_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4184258 - 4185090

Intron Length:

833

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TTCATCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

GTTTCTTTCATC

Flanking Amino Acid:

VLWKQEGLDLRMTPYGCLST

Intron Amino Acid Position:

811

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.1

1.02

0.7

86.6

22.3

Major BPS

87.6

0.93

0.9

89.3

Major PPT

82.7

0.74

0.8

77.2

31.4

Minor 5ss

30.6

-2.2

2.6

35.8

41.1

Minor BPS

64.9

0.45

1.7

74.58

36.6

Associated Gene:

Gene:

PIK3CD

Ensembl Gene ID:

ENSAPLG00000008183

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008631

4169135 - 4189459

20325