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Intron Name: Anas_platyrhynchos_platyrhynchos_22_4197358_4198069_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4197358 - 4198069

Intron Length:

712

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGATT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTGTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTATCAT

U12 Branch Point Sequence:

ACTCCGTTCATT

Flanking Amino Acid:

HNLANPHPFSVVPSTATVVI

Intron Amino Acid Position:

827

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.7

1.03

0.8

91.6

26.4

Major BPS

70.5

0.51

1.3

41.2

Major PPT

88.6

0.87

0.8

84.2

30.7

Minor 5ss

38.2

-1.3

3.4

56.9

47.4

Minor BPS

46.5

-0.1

2.4

67.25

Associated Gene:

Gene:

CLSTN1

Ensembl Gene ID:

ENSAPLG00000007340

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031602

4196254 - 4223701

27448

ENSAPLT00000029348

4196254 - 4228087

31834

ENSAPLT00000007706

4196254 - 4224543

28290

ENSAPLT00000034270

4196254 - 4228087

31834