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Intron Name: Anas_platyrhynchos_platyrhynchos_22_4198206_4199724_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4198206 - 4199724

Intron Length:

1519

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTAAG

5'SS Class:

strong_major

3'SS Sequence:

CTGTTGTACCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAACAA

U12 Branch Point Sequence:

GGATTAACAATT

Flanking Amino Acid:

RYVSNEFKVEVNVIHTANPI

Intron Amino Acid Position:

782

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

79.7

35.4

Major BPS

61.8

0.29

1.1

69.7

35.6

Major PPT

65.3

0.34

58.2

42.3

Minor 5ss

41.2

-1

2.5

50.1

46.4

Minor BPS

42.2

-0.5

1.9

57.06

38.8

Associated Gene:

Gene:

CLSTN1

Ensembl Gene ID:

ENSAPLG00000007340

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029348

4196254 - 4228087

31834

ENSAPLT00000007706

4196254 - 4224543

28290

ENSAPLT00000034270

4196254 - 4228087

31834

ENSAPLT00000031602

4196254 - 4223701

27448