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Intron Name: Anas_platyrhynchos_platyrhynchos_22_4214988_4223170_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4214988 - 4223170

Intron Length:

8183

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTGAATCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

TTACTTTGAATC

Flanking Amino Acid:

LDKDAPLRFAGEICGFKIHG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

81.1

32.6

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

73.5

0.53

0.9

67.3

Minor 5ss

33.3

-1.9

3.3

47.8

47.9

Minor BPS

56.6

0.19

1.3

65.09

34.2

Associated Gene:

Gene:

CLSTN1

Ensembl Gene ID:

ENSAPLG00000007340

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031602

4196254 - 4223701

27448

ENSAPLT00000029348

4196254 - 4228087

31834