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Intron Name: Anas_platyrhynchos_platyrhynchos_22_4216467_4223170_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4216467 - 4223170

Intron Length:

6704

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCCCTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATTAC

U12 Branch Point Sequence:

TATTACTGACTT

Flanking Amino Acid:

LDKDAPLRFAESFEVTVTKE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

81.1

32.6

Major BPS

74.8

0.62

1.1

40.5

Major PPT

83.8

0.76

0.6

82.3

22.4

Minor 5ss

33.3

-1.9

3.3

47.8

47.9

Minor BPS

52.4

0.15

1.9

75.29

41.2

Associated Gene:

Gene:

CLSTN1

Ensembl Gene ID:

ENSAPLG00000007340

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034270

4196254 - 4228087

31834

ENSAPLT00000007706

4196254 - 4224543

28290