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© 2019-2022 Kanadia Lab,
PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_22_42216_42934_R

Intron Information:

Intron Rank:
2
Intron Class:
major
Intron Phase:
1
Intron Coordinates:
42216 - 42934
Intron Length:
719

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
TAG|GTAATCCTA
5'SS Class:
major
3'SS Sequence:
CATCTCTTTTTAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTCTGAT
U12 Branch Point Sequence:
TTTTTCCCATCT
Flanking Amino Acid:
SLLEGEPSMLGAVQMLSTTF
Intron Amino Acid Position:
112

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
79.2
0.69
1
70.8
41.1
Major BPS
91.3
1.03
0.7
79.6
35.6
Major PPT
79.4
0.66
0.8
77.3
31
Minor 5ss
41.5
-0.9
3.1
56.7
47.4
Minor BPS
50.7
0.1
2.1
80.75
40.9

Associated Gene:

Gene:
SLC35E2B
Ensembl Gene ID:
ENSAPLG00000011973
Chromosome:
22

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000012468
37047 - 45205
8159