Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_22_4303955_4304028_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4303955 - 4304028

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTATTTAG

5'SS Class:

major

3'SS Sequence:

CTCTGTTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

AATATCTTAAAT

Flanking Amino Acid:

CEDTTRGSGERYHHQKLLSS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.54

1.2

68.9

38.2

Major BPS

73.1

0.58

79.6

29.1

Major PPT

80.7

0.69

0.8

76.2

32.4

Minor 5ss

-1.6

2.6

41.4

Minor BPS

66.6

0.6

1.4

77.81

37.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020926

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029754

4303638 - 4305580

1943