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Intron Name: Anas_platyrhynchos_platyrhynchos_22_4309973_4311678_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4309973 - 4311678

Intron Length:

1706

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAGGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TCTCCTGTCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTTAT

U12 Branch Point Sequence:

ATGAGCACAACT

Flanking Amino Acid:

DNFEGYMVALGIDFATRKIA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

77.6

32.8

Major BPS

74.8

0.62

0.9

63.7

35.1

Major PPT

65.4

0.35

65.9

33.7

Minor 5ss

30.6

-2.2

3.4

39.4

46.5

Minor BPS

44.2

-0.3

2.2

64.69

45.1

Associated Gene:

Gene:

RBP7

Ensembl Gene ID:

ENSAPLG00000027050

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040530

4309900 - 4312603

2704