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Intron Name: Anas_platyrhynchos_platyrhynchos_22_4331248_4338694_F


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
4331248 - 4338694

Intron Length:
7447

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTGACTTCT

5'SS Class:
major

3'SS Sequence:
TGTATTTTTAAAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGTGTAT

U12 Branch Point Sequence:
GTATTTTTAAAG

Flanking Amino Acid:
VGSFGSSSLSSMGGSGSSSV

Intron Amino Acid Position:
270

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.4
0.69
1.1
77.5
33.5

Major BPS
56.3
0.16
1.5
57.4
49.1

Major PPT
74.3
0.55
1.1
74.6
39.1

Minor 5ss
42.9
-0.8
2.8
59.5
45

Minor BPS
60.9
0.21
1.5
61.86
39.9

Associated Gene:

Gene:
UBE4B

Ensembl Gene ID:

Chromosome:
22

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

4317140 - 4358477
41338