Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_22_4392715_4393429_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4392715 - 4393429

Intron Length:

715

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

GTTCCTCTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTAAA

U12 Branch Point Sequence:

GTTTCCTAAACA

Flanking Amino Acid:

ADLMDAGNKARTVAATNMNE

Intron Amino Acid Position:

203

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.5

0.98

0.7

80.9

25.7

Major BPS

72.7

0.57

72.1

31.1

Major PPT

79.9

0.67

0.8

77.6

31.1

Minor 5ss

27.5

-2.6

33.8

42.3

Minor BPS

76.2

0.82

1.6

84.27

35.8

Associated Gene:

Gene:

KIF1B

Ensembl Gene ID:

ENSAPLG00000006535

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025680

4369908 - 4453234

83327

ENSAPLT00000007024

4369908 - 4453234

83327