Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_22_4448272_4449003_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4448272 - 4449003

Intron Length:

732

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCAGT

5'SS Class:

strong_major

3'SS Sequence:

TTTGACTGCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

TATTTTTTGACT

Flanking Amino Acid:

LCKMADTGSPGMQRRRRKVL

Intron Amino Acid Position:

1421

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.95

0.9

81.8

38.5

Major BPS

87.3

0.93

0.8

36.5

Major PPT

71.9

0.49

69.5

41.3

Minor 5ss

41.1

-1

2.9

57.9

46.4

Minor BPS

76.7

0.92

87.22

31.8

Associated Gene:

Gene:

KIF1B

Ensembl Gene ID:

ENSAPLG00000006535

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025680

4369908 - 4453234

83327

ENSAPLT00000007024

4369908 - 4453234

83327