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Intron Name: Anas_platyrhynchos_platyrhynchos_22_4464833_4467316_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4464833 - 4467316

Intron Length:

2484

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGCAGG

5'SS Class:

strong_major

3'SS Sequence:

TCCCTGTGTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

AACTTGCTAATT

Flanking Amino Acid:

LEYGVPVTLIGEAVFARCLS

Intron Amino Acid Position:

282

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

72.7

44.5

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

61.3

0.26

1.1

61.7

Minor 5ss

38.8

-1.3

2.8

48.8

Minor BPS

45.4

-0.2

2.2

63.46

41.3

Associated Gene:

Gene:

PGD

Ensembl Gene ID:

ENSAPLG00000006367

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006632

4459855 - 4470950

11096