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Intron Name: Anas_platyrhynchos_platyrhynchos_22_4469877_4470830_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4469877 - 4470830

Intron Length:

954

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGCC

5'SS Class:

strong_major

3'SS Sequence:

GTTCTTTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

GTCTTTTTACTT

Flanking Amino Acid:

HEMLPANLVQAQRDYFGAHT

Intron Amino Acid Position:

445

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

77.2

32.8

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

0.77

0.8

77.1

37.1

Minor 5ss

32.6

-2

3.4

44.1

43.8

Minor BPS

57.4

0.31

1.6

71.21

40.9

Associated Gene:

Gene:

PGD

Ensembl Gene ID:

ENSAPLG00000006367

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006632

4459855 - 4470950

11096