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Intron Name: Anas_platyrhynchos_platyrhynchos_22_4590617_4595370_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4590617 - 4595370

Intron Length:

4754

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGGAGG

5'SS Class:

major

3'SS Sequence:

CATCTTTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATAAAT

U12 Branch Point Sequence:

TGTATATAAATT

Flanking Amino Acid:

LSEPWKMYLRRFHFRTEGGA

Intron Amino Acid Position:

1039

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

64.7

46.6

Major BPS

74.5

0.61

79.6

29.1

Major PPT

85.4

0.8

80.2

31.4

Minor 5ss

32.1

-2

3.1

40.5

45.4

Minor BPS

48.7

-0

1.9

70.19

40.9

Associated Gene:

Gene:

CASZ1

Ensembl Gene ID:

ENSAPLG00000006079

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006323

4574835 - 4620589

45755