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Intron Name: Anas_platyrhynchos_platyrhynchos_22_4606693_4611213_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4606693 - 4611213

Intron Length:

4521

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCAAA

5'SS Class:

strong_major

3'SS Sequence:

CTCGTGCTCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCCT

U12 Branch Point Sequence:

TCTTCCTTTCTC

Flanking Amino Acid:

DVNIYQKYIARFSGSQHCGH

Intron Amino Acid Position:

483

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

74.1

38.3

Major BPS

34.6

-0.9

4.2

73.6

41.8

Major PPT

71.2

0.48

0.9

64.5

36.5

Minor 5ss

37.3

-1.4

3.1

47.6

48.1

Minor BPS

44.8

-0.4

3.6

70.08

Associated Gene:

Gene:

CASZ1

Ensembl Gene ID:

ENSAPLG00000006079

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044699

4574835 - 4620589

45755

ENSAPLT00000025729

4574835 - 4620470

45636

ENSAPLT00000006323

4574835 - 4620589

45755