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Intron Name: Anas_platyrhynchos_platyrhynchos_22_4840525_4841242_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4840525 - 4841242

Intron Length:

718

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTGTCAG

5'SS Class:

major

3'SS Sequence:

TCTTTATATTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

ACATCTTTATAT

Flanking Amino Acid:

NLVYVVNYPKDNKRKMDETD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.2

0.55

1.2

62.7

43.2

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

83.3

0.75

0.9

81.9

33.8

Minor 5ss

-1.6

2.6

41.2

45.2

Minor BPS

54.4

0.21

1.7

68.3

42.5

Associated Gene:

Gene:

TARDBP

Ensembl Gene ID:

ENSAPLG00000006001

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006237

4840272 - 4844333

4062