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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_22_4901155_4901737_R

Intron Information:

Intron Rank:
19
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
4901155 - 4901737
Intron Length:
583

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
ATG|GTATGTCAC
5'SS Class:
major
3'SS Sequence:
GTTGCTTTCACAG|C
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTTTCAT
U12 Branch Point Sequence:
GTTGCTTTCACA
Flanking Amino Acid:
NIVSVRQQAMQEQANKKRER
Intron Amino Acid Position:
695

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
78.7
0.68
1
66.7
38.7
Major BPS
100
1.24
0.5
100
0
Major PPT
78.2
0.63
0.9
72
38
Minor 5ss
40.7
-1
2.8
49.5
41.3
Minor BPS
59.1
0.28
1.9
71.5
41.1

Associated Gene:

Gene:
EXOSC10
Ensembl Gene ID:
ENSAPLG00000006652
Chromosome:
22

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000006977
4898116 - 4912721
14606