Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_22_4904029_4904373_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4904029 - 4904373

Intron Length:

345

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTAAGCAAT

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTTT

U12 Branch Point Sequence:

TTTTTTTTTTTT

Flanking Amino Acid:

VATATVSIFSECDEDDGNEK

Intron Amino Acid Position:

584

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.4

0.48

1.1

70.9

40.9

Major BPS

38.1

-0.7

4.3

71.7

44.6

Major PPT

94.8

1.01

0.5

92.6

17.3

Minor 5ss

-0.8

58.5

45.8

Minor BPS

43.9

-0.3

3.5

78.47

38.5

Associated Gene:

Gene:

EXOSC10

Ensembl Gene ID:

ENSAPLG00000006652

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006977

4898116 - 4912721

14606