Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_22_4907383_4907547_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4907383 - 4907547

Intron Length:

165

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGCTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCCATCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCCCAT

U12 Branch Point Sequence:

TTTTTCCCATCC

Flanking Amino Acid:

WQRSRDICLKKYIKPLFSDE

Intron Amino Acid Position:

396

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

75.8

39.8

Major BPS

72.3

0.55

1.2

80.7

33.2

Major PPT

82.4

0.73

0.8

74.7

35.3

Minor 5ss

-1.6

3.6

55.8

48.4

Minor BPS

-0.1

2.1

71.11

40.1

Associated Gene:

Gene:

EXOSC10

Ensembl Gene ID:

ENSAPLG00000006652

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006977

4898116 - 4912721

14606