Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_22_4910177_4910954_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4910177 - 4910954

Intron Length:

778

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGATGT

5'SS Class:

strong_major

3'SS Sequence:

ATCGGTTGTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCATAT

U12 Branch Point Sequence:

TGTTCCATATCG

Flanking Amino Acid:

KPNALKPLPEALTKSGRERK

Intron Amino Acid Position:

132

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.6

0.98

0.8

81.6

33.2

Major BPS

61.6

0.29

1.1

57.2

40.1

Major PPT

68.8

0.42

1.1

65.3

Minor 5ss

39.7

-1.2

3.1

56.6

47.5

Minor BPS

0.11

69.5

43.3

Associated Gene:

Gene:

EXOSC10

Ensembl Gene ID:

ENSAPLG00000006652

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006977

4898116 - 4912721

14606