Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_22_4927524_4928279_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4927524 - 4928279

Intron Length:

756

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTAAG

5'SS Class:

strong_major

3'SS Sequence:

CTCCTCTTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATGAT

U12 Branch Point Sequence:

TTTTGTTGAAGT

Flanking Amino Acid:

ATEHDRNWYKAWHAWAVMNF

Intron Amino Acid Position:

1792

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

1.2

77.9

38.6

Major BPS

84.6

0.86

41.2

Major PPT

75.1

0.56

0.9

32.5

Minor 5ss

30.5

-2.2

2.5

33.4

41.8

Minor BPS

53.8

0.2

2.1

80.32

41.9

Associated Gene:

Gene:

MTOR

Ensembl Gene ID:

ENSAPLG00000007266

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007683

4914729 - 4978732

64004