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Intron Name: Anas_platyrhynchos_platyrhynchos_22_4932982_4933627_R


Intron Information:

Intron Rank:
35

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
4932982 - 4933627

Intron Length:
646

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CTG|GTGAGCATT

5'SS Class:
strong_major

3'SS Sequence:
TAACTTTCTCTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCTAAC

U12 Branch Point Sequence:
CTCTTTGTAACT

Flanking Amino Acid:
ASLCGKSGRLALAHKTLVLL

Intron Amino Acid Position:
1670

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
81
0.73
0.9
79.6
35.4

Major BPS
84.6
0.86
0.8
83.9
22.3

Major PPT
74.3
0.55
0.9
66.6
40.1

Minor 5ss
40
-1.1
3.1
54.5
43.9

Minor BPS
55.3
0.24
2
74.22
43.6

Associated Gene:

Gene:
MTOR

Ensembl Gene ID:

Chromosome:
22

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

4914729 - 4978732
64004