Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_22_4941266_4943348_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4941266 - 4943348

Intron Length:

2083

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

CTCTGTCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

TTATTCTGATTT

Flanking Amino Acid:

EYAMKHFGELEIQATWYEKL

Intron Amino Acid Position:

1447

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

73.2

37.4

Major BPS

88.7

0.96

0.8

36.5

Major PPT

73.9

0.54

0.8

65.2

36.3

Minor 5ss

31.6

-2.1

2.9

39.6

39.8

Minor BPS

58.2

0.33

1.7

77.32

39.3

Associated Gene:

Gene:

MTOR

Ensembl Gene ID:

ENSAPLG00000007266

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007683

4914729 - 4978732

64004