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Intron Name: Anas_platyrhynchos_platyrhynchos_22_4943425_4959596_R


Intron Information:

Intron Rank:
28

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
4943425 - 4959596

Intron Length:
16172

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAGGACCA

5'SS Class:
major

3'SS Sequence:
TCCACCTCTGCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGTTAAA

U12 Branch Point Sequence:
GCTGTGTTAAAT

Flanking Amino Acid:
PTPAILESLISINNKLQQPE

Intron Amino Acid Position:
1421

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.5
0.7
1
65.3
40.7

Major BPS
75.2
0.63
1.1
75.9
36.3

Major PPT
75.7
0.58
0.8
69
31.3

Minor 5ss
30.9
-2.2
3.3
39.8
45.7

Minor BPS
47
-0.1
2.2
64.96
45.5

Associated Gene:

Gene:
MTOR

Ensembl Gene ID:

Chromosome:
22

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

4914729 - 4978732
64004