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Intron Name: Anas_platyrhynchos_platyrhynchos_22_4964351_4964938_R


Intron Information:

Intron Rank:
20

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
4964351 - 4964938

Intron Length:
588

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AGA|GTGAGTACA

5'SS Class:
major

3'SS Sequence:
TTTTCTTCTGTAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TGTTTAT

U12 Branch Point Sequence:
GTTTGTTTATTT

Flanking Amino Acid:
YMDEIVTLMRDFWVMNNSIQ

Intron Amino Acid Position:
1043

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73
0.54
1
70.5
35.4

Major BPS
81.3
0.78
1.1
71.7
44.6

Major PPT
88.7
0.87
0.6
85.5
21.8

Minor 5ss
31.8
-2.1
2.6
31.3
35.7

Minor BPS
54.6
0.22
2
76.04
41.4

Associated Gene:

Gene:
MTOR

Ensembl Gene ID:

Chromosome:
22

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

4914729 - 4978732
64004