Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_22_4971691_4971867_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4971691 - 4971867

Intron Length:

177

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

GGTCCCTTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAC

U12 Branch Point Sequence:

CTTCTCTTAACT

Flanking Amino Acid:

AALPPKDFAHKRQKSVQVDA

Intron Amino Acid Position:

474

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.7

0.94

0.8

93.7

19.8

Major BPS

77.1

0.67

77.9

32.2

Major PPT

77.4

0.62

0.9

73.1

37.2

Minor 5ss

43.4

-0.7

2.9

60.8

37.6

Minor BPS

79.7

1.01

1.2

88.99

35.6

Associated Gene:

Gene:

MTOR

Ensembl Gene ID:

ENSAPLG00000007266

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007683

4914729 - 4978732

64004