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Intron Name: Anas_platyrhynchos_platyrhynchos_22_4972055_4972915_R


Intron Information:

Intron Rank:
8

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
4972055 - 4972915

Intron Length:
861

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTGAGGAGA

5'SS Class:
strong_major

3'SS Sequence:
CTCTTGGTGGCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTCCAAT

U12 Branch Point Sequence:
CCTCCAATATCT

Flanking Amino Acid:
LAAFRPSAFTADQYLPDTMN

Intron Amino Acid Position:
412

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
85.7
0.84
0.9
74.8
37

Major BPS
59.5
0.24
1.3
68.4
35.9

Major PPT
68.2
0.41
1.1
64.2
41.5

Minor 5ss
26.2
-2.7
2.9
30.9
42.7

Minor BPS
44.5
-0.3
2.1
63.58
46

Associated Gene:

Gene:
MTOR

Ensembl Gene ID:

Chromosome:
22

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

4914729 - 4978732
64004