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Intron Name: Anas_platyrhynchos_platyrhynchos_22_4973025_4973329_R


Intron Information:

Intron Rank:
7

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
4973025 - 4973329

Intron Length:
305

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAAGTGTT

5'SS Class:
strong_major

3'SS Sequence:
TGTGTCCTTTCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
AGCTCAA

U12 Branch Point Sequence:
CCATCCTTCAGA

Flanking Amino Acid:
RDLMEEKFDQVCQWVLKCRT

Intron Amino Acid Position:
376

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
98.4
1.14
0.6
94.3
17.7

Major BPS
61.8
0.29
1.1
63.4
35.6

Major PPT
81.4
0.71
0.9
77.7
36.7

Minor 5ss
38.6
-1.3
3.4
57.8
46.8

Minor BPS
49.5
-0
2.1
59.37
46.5

Associated Gene:

Gene:
MTOR

Ensembl Gene ID:

Chromosome:
22

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

4914729 - 4978732
64004