Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_22_4974192_4974953_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4974192 - 4974953

Intron Length:

762

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGAAAA

5'SS Class:

major

3'SS Sequence:

TTCTTTCCCCAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGTCAT

U12 Branch Point Sequence:

GGTCATTGAGCT

Flanking Amino Acid:

KEMQKPQWYRHTYEEAEKGF

Intron Amino Acid Position:

239

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.1

0.54

70.6

35.2

Major BPS

69.7

0.49

1.3

71.4

45.1

Major PPT

72.5

0.51

71.8

33.1

Minor 5ss

34.1

-1.8

2.9

41.1

Minor BPS

44.9

-0.3

1.8

61.55

41.4

Associated Gene:

Gene:

MTOR

Ensembl Gene ID:

ENSAPLG00000007266

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007683

4914729 - 4978732

64004