Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_22_502087_510380_R

Intron Information:

Intron Rank:

153808

Intron Class:

major

Intron Phase:

Intron Coordinates:

502087 - 510380

Intron Length:

8294

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGTGTGC

5'SS Class:

major

3'SS Sequence:

ATTATTATTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTTTTTTAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.3

0.34

1.1

53.7

40.3

Major BPS

90.4

0.7

90.2

19.3

Major PPT

80.8

0.69

0.9

74.7

39.2

Minor 5ss

30.3

-2.3

3.4

41.1

45.5

Minor BPS

79.5

1.2

92.62

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030245

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035434

499432 - 510422

10991