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Intron Name: Anas_platyrhynchos_platyrhynchos_22_5176148_5176777_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5176148 - 5176777

Intron Length:

630

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTGTTCG

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TTTTTTTTTTTT

Flanking Amino Acid:

RNLIKNPRAEESFKHWKLDK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.58

1.2

66.2

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

95.8

1.03

0.5

96.6

11.7

Minor 5ss

-0.8

2.4

51.1

45.4

Minor BPS

43.9

-0.3

3.5

78.47

38.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009183

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009563

5175889 - 5179039

3151