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Intron Name: Anas_platyrhynchos_platyrhynchos_22_5182054_5182169_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5182054 - 5182169

Intron Length:

116

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCAGG

5'SS Class:

major

3'SS Sequence:

GTTTTTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTTAG

U12 Branch Point Sequence:

TGCTCTGTAGGC

Flanking Amino Acid:

CDAVLDNNPPGCTFTVLVHT

Intron Amino Acid Position:

143

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

1.1

63.6

48.1

Major BPS

-0.1

1.6

46.8

46.7

Major PPT

89.9

0.9

0.7

84.9

29.9

Minor 5ss

37.4

-1.4

3.1

48.3

47.5

Minor BPS

42.4

-0.6

2.3

54.17

44.3

Associated Gene:

Gene:

MAD2L2

Ensembl Gene ID:

ENSAPLG00000009488

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009907

5180752 - 5184243

3492