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Intron Name: Anas_platyrhynchos_platyrhynchos_22_5235611_5236101_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5235611 - 5236101

Intron Length:

491

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

CTTTCCTTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATAAAA

U12 Branch Point Sequence:

TAGAATAAAACA

Flanking Amino Acid:

VDPVSFLSWKDEAFALWIEQ

Intron Amino Acid Position:

587

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

80.5

33.9

Major BPS

56.5

0.16

0.9

63.3

29.1

Major PPT

79.5

0.66

0.9

76.6

31.9

Minor 5ss

31.4

-2.1

2.9

42.1

44.5

Minor BPS

41.5

-0.6

1.9

51.16

Associated Gene:

Gene:

MTHFR

Ensembl Gene ID:

ENSAPLG00000009771

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010203

5235413 - 5242712

7300