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Intron Name: Anas_platyrhynchos_platyrhynchos_22_5236222_5236450_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5236222 - 5236450

Intron Length:

229

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGCTGC

5'SS Class:

major

3'SS Sequence:

ATTTTCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCTTTAT

U12 Branch Point Sequence:

AAGGCTTTATTT

Flanking Amino Acid:

RVNYHIVNVKGQNITNAPDL

Intron Amino Acid Position:

547

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

1.1

64.1

43.4

Major BPS

66.1

0.4

1.3

59.6

46.8

Major PPT

90.2

0.9

0.7

85.3

28.7

Minor 5ss

42.8

-0.8

3.2

58.8

46.1

Minor BPS

49.7

0.06

1.7

62.79

42.2

Associated Gene:

Gene:

MTHFR

Ensembl Gene ID:

ENSAPLG00000009771

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010203

5235413 - 5242712

7300