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Intron Name: Anas_platyrhynchos_platyrhynchos_22_5236553_5237942_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5236553 - 5237942

Intron Length:

1390

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTGCAC

5'SS Class:

major

3'SS Sequence:

CACATCCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAG

U12 Branch Point Sequence:

TCTTCCACATCC

Flanking Amino Acid:

GPSGGYVFQKAYLEFFTSNE

Intron Amino Acid Position:

513

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.3

0.43

1.1

42.1

Major BPS

0.22

1.5

67.7

36.5

Major PPT

65.3

0.35

0.9

57.3

32.9

Minor 5ss

-2.3

3.4

41.6

45.1

Minor BPS

49.1

-0

2.1

67.7

43.6

Associated Gene:

Gene:

MTHFR

Ensembl Gene ID:

ENSAPLG00000009771

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010203

5235413 - 5242712

7300