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Intron Name: Anas_platyrhynchos_platyrhynchos_22_5238126_5238525_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5238126 - 5238525

Intron Length:

400

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

CTCCTCACGGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAC

U12 Branch Point Sequence:

TCTCTCCTCACG

Flanking Amino Acid:

SGEPNKNGHKVTCMPWNDDP

Intron Amino Acid Position:

452

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.01

0.7

86.6

22.3

Major BPS

72.4

0.56

73.5

32.5

Major PPT

62.2

0.28

0.9

58.8

31.4

Minor 5ss

28.9

-2.4

3.2

39.6

46.4

Minor BPS

46.5

-0.4

2.1

56.84

44.6

Associated Gene:

Gene:

MTHFR

Ensembl Gene ID:

ENSAPLG00000009771

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010203

5235413 - 5242712

7300