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Intron Name: Anas_platyrhynchos_platyrhynchos_22_5239129_5239792_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5239129 - 5239792

Intron Length:

664

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCTGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTGTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAATCAA

U12 Branch Point Sequence:

AGATCTTCAGCT

Flanking Amino Acid:

KRLGLWKEDPRRPLPWAVSA

Intron Amino Acid Position:

346

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

71.1

37.5

Major BPS

58.9

0.22

1.1

61.7

34.2

Major PPT

88.1

0.86

0.8

84.7

30.1

Minor 5ss

37.8

-1.4

47.1

48.3

Minor BPS

51.1

0.11

1.8

68.73

41.8

Associated Gene:

Gene:

MTHFR

Ensembl Gene ID:

ENSAPLG00000009771

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010203

5235413 - 5242712

7300