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Intron Name: Anas_platyrhynchos_platyrhynchos_22_5247003_5247339_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5247003 - 5247339

Intron Length:

337

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGATTT

5'SS Class:

strong_major

3'SS Sequence:

TGTTCTTACACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAA

U12 Branch Point Sequence:

GCTTCTTAAAAA

Flanking Amino Acid:

LEVLESMDNKKARKYEAVKW

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.2

1.04

0.7

90.6

21.2

Major BPS

82.2

0.8

71.9

35.8

Major PPT

77.4

0.62

0.9

72.7

36.6

Minor 5ss

43.9

-0.7

3.2

64.8

46.5

Minor BPS

55.2

0.16

1.8

64.9

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028369

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032098

5245164 - 5251017

5854