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Intron Name: Anas_platyrhynchos_platyrhynchos_22_5247406_5248107_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5247406 - 5248107

Intron Length:

702

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTA|GTAAGTGTC

5'SS Class:

major

3'SS Sequence:

TTTTTTTTCATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TTTTTTTTCATA

Flanking Amino Acid:

VFAIGVCTGLVGLFVDFFVR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

75.1

33.1

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

90.2

0.9

0.6

87.8

22.4

Minor 5ss

39.1

-1.2

3.3

54.2

38.3

Minor BPS

64.7

0.46

1.7

33.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028369

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032098

5245164 - 5251017

5854