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Intron Name: Anas_platyrhynchos_platyrhynchos_22_5248189_5250960_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5248189 - 5250960

Intron Length:

2772

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TTA|GCATATGGT

5'SS Class:

weak_major

3'SS Sequence:

GTACTCTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGGAG

U12 Branch Point Sequence:

GGAGCCCCAATT

Flanking Amino Acid:

RVVQSCIFYLLGRRFLLLES

Intron Amino Acid Position:

120

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.2

0.05

1.3

59.8

41.7

Major BPS

-0

1.8

57.1

49.4

Major PPT

80.3

0.68

0.9

77.2

36.8

Minor 5ss

31.4

-2.1

4.3

49.1

42.9

Minor BPS

45.3

-0.2

1.9

59.83

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028369

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032098

5245164 - 5251017

5854