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Intron Name: Anas_platyrhynchos_platyrhynchos_22_5254000_5254331_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5254000 - 5254331

Intron Length:

332

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

TCTTGTGTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTCAT

U12 Branch Point Sequence:

TAGTCATGATTC

Flanking Amino Acid:

SAILQLFHQDGTFSPVTLSL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

36.6

Major BPS

0.67

1.1

77.7

37.1

Major PPT

81.8

0.72

0.9

75.5

38.3

Minor 5ss

30.8

-2.2

2.6

33.6

35.6

Minor BPS

46.5

-0.2

1.9

57.82

40.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010122

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010580

5253939 - 5258106

4168