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Intron Name: Anas_platyrhynchos_platyrhynchos_22_5275977_5276719_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5275977 - 5276719

Intron Length:

743

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CCG|GCTCGGCCC

5'SS Class:

weak_major

3'SS Sequence:

GGAGCACGGACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCCCAA

U12 Branch Point Sequence:

GGCTTCCCAAGG

Flanking Amino Acid:

GCNHYRARRSRLRRRTGGQG

Intron Amino Acid Position:

132

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.4

0.18

1.4

41.7

Major BPS

63.1

0.33

1.2

72.7

34.3

Major PPT

47.3

-0.1

1.1

35.3

40.3

Minor 5ss

17.5

-3.8

3.7

27.3

Minor BPS

40.2

-0.8

41.4

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000031057

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021082

5275721 - 5277222

1502