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Intron Name: Anas_platyrhynchos_platyrhynchos_22_5308548_5308680_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5308548 - 5308680

Intron Length:

133

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTGAGTCCA

5'SS Class:

major

3'SS Sequence:

CCCTTCCTCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAC

U12 Branch Point Sequence:

CTACAATTAACT

Flanking Amino Acid:

GGDGITSSCNGDSGGPLNCQ

Intron Amino Acid Position:

214

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

69.7

36.3

Major BPS

73.1

0.57

0.9

73.7

27.1

Major PPT

78.5

0.64

0.7

26.1

Minor 5ss

31.5

-2.1

2.9

38.2

39.5

Minor BPS

54.5

0.22

1.8

73.09

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010750

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027013

5308353 - 5315414

7062

ENSAPLT00000024232

5308353 - 5313591

5239

ENSAPLT00000011242

5306508 - 5317016

10509