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Intron Name: Anas_platyrhynchos_platyrhynchos_22_5309586_5310364_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5309586 - 5310364

Intron Length:

779

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

CATATGACCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

ATTCTCATATAT

Flanking Amino Acid:

ERWNSYNVANGYDIALIKLT

Intron Amino Acid Position:

119

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

82.3

32.2

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

62.8

0.29

54.4

39.9

Minor 5ss

44.3

-0.6

2.8

53.4

43.8

Minor BPS

47.3

-0.1

1.9

70.15

40.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010750

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027013

5308353 - 5315414

7062

ENSAPLT00000024232

5308353 - 5313591

5239

ENSAPLT00000011242

5306508 - 5317016

10509